Roseobacter sp.

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseobacter

Description

Roseobacter sp. is a Gram-negative, rod-shaped bacterium predominantly found in deep-sea habitats. This genus is part of the Roseobacter clade, which is known for its diverse metabolic capabilities and ecological significance, particularly in marine environments. Roseobacter sp. is characterized by having two replicons, which indicates a unique genomic organization that may contribute to its adaptability in the oligotrophic conditions often found in deep-sea ecosystems. The presence of two replicons can influence gene regulation and replication, potentially providing advantages in nutrient acquisition and survival in challenging environments. The accessions for Roseobacter sp. include PCCY00000000.1 and PAKB00000000.1, which are references for genomic data that can provide insights into its genetic makeup and functional potential. This information can be crucial for understanding the roles that Roseobacter sp. plays in biogeochemical cycles, including carbon and sulfur cycling, which are vital for maintaining the health of marine ecosystems. Overall, the ecological role of Roseobacter sp. in deep-sea habitats underscores its importance in microbial communities. Its metabolic versatility and genomic features may allow it to thrive in nutrient-poor environments, thereby contributing to the overall functioning and stability of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseobacter
SpeciesRoseobacter sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Roseobacter sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdeep-sea
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Roseobacter sp. isolate SAT8 MHASMcontig_2226886, whole

Gene Summary

Adenine Count

708818 bp

Thymine Count

718792 bp

Guanine Count

1112635 bp

Cytosine Count

1085866 bp

Genome Length

3640882 bp

Protein-coding Genes

3392 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine abc transporter atp-binding proteinCMN12_05270Not AvailablePositive1082014 - 108311439900.1
spermidine/putrescine abc transporter substrate-binding proteinCMN12_05275Not AvailablePositive1083226 - 108434140721.7
polyamine abc transporter permeaseCMN12_05280Not AvailablePositive1084443 - 108611061175.2
abc transporter permeaseCMN12_05285Not AvailablePositive1086115 - 108729342417.2
murein transglycosylaseCMN12_05290Not AvailableNegative1087373 - 108865344511.7
ribonuclease rCMN12_05295Not AvailableNegative1088756 - 109103582323.5
hypothetical proteinCMN12_05300Not AvailableNegative1091039 - 109164121994.8
n-acetyltransferaseCMN12_05305Not AvailableNegative1091638 - 109206015322.3
succinyl-diaminopimelate desuccinylaseCMN12_05310Not AvailableNegative1092057 - 109320240853.4
hypothetical proteinCMN12_05315Not AvailableNegative1093342 - 109368012226.4

Displaying genes 1121 – 1130 of 7505 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.