Rodentibacter ratti

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter ratti is a rod-shaped bacterium characterized by a single replicon, which indicates a streamlined genomic structure. The bacterium is cataloged under the accession number MLAI00000000.1, providing a reference point for further genetic and taxonomic studies. This organism is part of a larger ecological community and may play specific roles in its environment, particularly in relation to its rodent hosts. The association between Rodentibacter ratti and rodents suggests potential implications for understanding host-microbe interactions and the ecological dynamics within rodent populations. The simplicity of its genomic structure, represented by a single replicon, could indicate a specialization or adaptation to its ecological niche, allowing it to thrive in the unique conditions associated with its rodent hosts. Overall, the biological and ecological significance of Rodentibacter ratti remains an area for further research, particularly concerning its interactions with hosts and potential impacts on rodent health and microbiomes. Understanding these relationships could contribute to broader insights into rodent ecology and the role of microorganisms in animal health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter ratti
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter ratti strain Ppn158 contig_31, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
na(+)/h(+) antiporter nhaaBKG88_06785Not AvailableNegative1415294 - 141645741384.1
branched-chain amino acid transport system ii carrier proteinBKG88_06790Not AvailablePositive1416660 - 141798848291.8
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbBKG88_06795Not AvailableNegative1418066 - 141880626609.3
ribonuclease rBKG88_06800Not AvailableNegative1418840 - 142117689800.4
two-component sensor histidine kinaseBKG88_06805Not AvailableNegative1421363 - 142272451945.9
dna-binding response regulatorBKG88_06810Not AvailableNegative1422727 - 142340724873.0
hypothetical proteinBKG88_06815Not AvailableNegative1423505 - 142415824106.7
pts glucose transporter subunit iibBKG88_06820Not AvailablePositive1424456 - 142594953886.7
bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rluaBKG88_06825Not AvailableNegative1425991 - 142665024992.5
rna polymerase-binding atpaseBKG88_06830Not AvailableNegative1426653 - 1429439104942.0

Displaying genes 1461 – 1470 of 2002 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.