archaeon

Kingdom

Phylum

Class

Order

Family

Genus

Description

Archaea are a distinct domain of life, characterized by their unique biochemical and genetic properties. One of the notable features of this group is that they can possess multiple replicons, with some archaea having four as indicated by available data. This trait may contribute to their adaptability and survival in a variety of environments. The genomic information of archaea can be accessed through specific accession numbers, which in this case are SDYN00000000.1, SDYM00000000.1, SDYL00000000.1, and SDYP00000000.1. These accessions represent sequences that can provide insights into the genetic makeup of these organisms, aiding in the understanding of their evolutionary relationships and functional capabilities. Ecologically, archaea are known to inhabit extreme environments, such as hot springs, salt lakes, and even the deep ocean, suggesting their ability to thrive under conditions that would be inhospitable to many other forms of life. This resilience may be linked to their unique cellular structures and metabolic pathways, which often allow them to utilize unconventional energy sources. In summary, the presence of multiple replicons in archaea, along with their genomic data, highlights their complexity and adaptability. Their evolutionary success in diverse and extreme habitats underscores the importance of archaea in various ecological niches, contributing to biogeochemical cycles and the overall functioning of ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: archaeon isolate PMG_111 scaffold_602565, whole genome

Gene Summary

Adenine Count

304723 bp

Thymine Count

297423 bp

Guanine Count

518533 bp

Cytosine Count

517098 bp

Genome Length

1701363 bp

Protein-coding Genes

1258 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEON62_06535Not AvailableNegative1599682 - 15998134767.65
hypothetical proteinEON62_06540Not AvailablePositive1599822 - 160039418732.1
hypothetical proteinEON62_06545Not AvailableNegative1600534 - 160120423757.2
hypothetical proteinEON62_06550Not AvailablePositive1601309 - 16015548873.73
cyclic diguanylate phosphodiesteraseEON62_06555Not AvailableNegative1601555 - 160202517290.9
hypothetical proteinEON62_06560Not AvailablePositive1603089 - 160359316460.3
trna(met) cytidine acetyltransferaseEON62_06565Not AvailablePositive1603594 - 160458235015.2
rhomboid family intramembrane serine proteaseEON62_06570Not AvailableNegative1604704 - 160524919975.8
rhomboid family intramembrane serine proteaseEON62_06575Not AvailableNegative1605152 - 160563017485.6
hypothetical proteinEON62_06580Not AvailablePositive1606649 - 160718619505.0

Displaying genes 1241 – 1250 of 12795 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

158 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da

Displaying 1–10 of 158 metabolites

Health Effects

No health effects information available for this bacterium.