Pseudomonas sp. 43NM1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 43NM1 is characterized by having a single replicon, which is indicative of its genomic structure. The organism is associated with the accession number MKGS00000000.1, providing a reference for its genetic information. Pseudomonas species are typically known for their metabolic diversity and capability to thrive in various environments, which often includes soil and water. These traits can contribute to their role in biogeochemical cycles and potential applications in bioremediation due to their ability to degrade pollutants. Understanding the genomic features of Pseudomonas sp. 43NM1 can provide insights into its ecological roles, particularly in nutrient cycling and interactions with other microorganisms. The presence of only one replicon may suggest a streamlined genome, which could be an adaptation to specific environmental niches or conditions. This structural characteristic may also influence its adaptability and survival strategies in fluctuating environments. In summary, Pseudomonas sp. 43NM1, with its single replicon and documented accession, represents a unique entity within the Pseudomonas genus, offering potential for further exploration of its ecological functions and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 43NM1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 43NM1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 43NM1 scaffold_99, whole genome shotgun sequence.

Gene Summary

Adenine Count

1250989 bp

Thymine Count

1233838 bp

Guanine Count

1810975 bp

Cytosine Count

1837771 bp

Genome Length

6133573 bp

Protein-coding Genes

5180 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyocin r2, holinBI292_09685Not AvailableNegative1891946 - 189229612355.2
Putative cro/ci transcriptional regulatorBI292_09690Not AvailableNegative1892835 - 189356927346.4
zeta toxinBI292_09695Not AvailablePositive1893819 - 189454426892.1
Putative mismatch repair proteinBI292_09700Not AvailablePositive1894905 - 189748495188.8
AttlNot AvailableNot AvailablePositive4811622 - 4811633Not Available
Putative integraseBI292_19350Not AvailableNegative4811842 - 481305045624.2
hypotheticalBI292_19355Not AvailableNegative4813242 - 48134758186.78
Hypothetical proteinBI292_19360Not AvailableNegative4813472 - 481401420956.1
hypothetical proteinBI292_19365Not AvailableNegative4814011 - 48142328195.03
hypotheticalBI292_19370Not AvailableNegative4814406 - 481481315065.4

Displaying genes 31 – 40 of 5340 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.