Marinomonas agarivorans

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Marinomonas

Description

Marinomonas agarivorans is a marine bacterium notable for its unique ability to degrade agar, a polysaccharide derived from red algae. This trait positions it as an important organism in marine ecosystems, particularly in nutrient cycling. The species is characterized by having a single replicon, which simplifies its genetic architecture and may impact its adaptability and evolutionary processes. The genome of Marinomonas agarivorans has been sequenced and is accessible under the accession number NHNK00000000.2. This genomic information can provide insights into its metabolic pathways and enzymatic capabilities, especially pertaining to agar degradation. The breakdown of agar not only contributes to the recycling of organic materials in marine environments but also supports the growth of other microorganisms that rely on simpler compounds generated from this process. In ecological terms, the ability of Marinomonas agarivorans to utilize agar as a carbon source highlights its role in the decomposition of marine plant matter. This process is vital for the health of marine ecosystems, as it facilitates nutrient availability for various marine organisms. By breaking down complex polysaccharides, Marinomonas agarivorans contributes to the overall biodiversity and stability of marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusMarinomonas
SpeciesMarinomonas agarivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinomonas agarivorans strain QM202 Qm202_contig_163, whole

Gene Summary

Adenine Count

945871 bp

Thymine Count

950509 bp

Guanine Count

672118 bp

Cytosine Count

666916 bp

Genome Length

3235607 bp

Protein-coding Genes

2970 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine--trna ligaseCBF23_014075Not AvailableNegative3004554 - 300593052297.1
duf393 domain-containing proteinCBF23_014080Not AvailablePositive3006217 - 300669318379.2
sdr family nad(p)-dependent oxidoreductaseCBF23_014085Not AvailablePositive3006702 - 300751429548.5
duf5062 family proteinCBF23_014090Not AvailableNegative3007567 - 30078309738.97
gntr family transcriptional regulatorCBF23_014095Not AvailablePositive3008176 - 300897930026.9
methylisocitrate lyaseCBF23_014100Not AvailablePositive3008986 - 300988232314.5
2-methylcitrate synthaseCBF23_014105Not AvailablePositive3010010 - 301113742051.2
bifunctional 2-methylcitrate dehydratase/aconitate hydrataseCBF23_014110Not AvailablePositive3011184 - 301267455323.1
trna(met) cytidine acetyltransferaseCBF23_014115Not AvailablePositive3012792 - 301511086815.0
giy-yig nuclease family proteinCBF23_014120Not AvailableNegative3015087 - 301547914680.8

Displaying genes 2801 – 2810 of 3044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.