Marinomonas agarivorans

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Marinomonas

Description

Marinomonas agarivorans is a marine bacterium notable for its unique ability to degrade agar, a polysaccharide derived from red algae. This trait positions it as an important organism in marine ecosystems, particularly in nutrient cycling. The species is characterized by having a single replicon, which simplifies its genetic architecture and may impact its adaptability and evolutionary processes. The genome of Marinomonas agarivorans has been sequenced and is accessible under the accession number NHNK00000000.2. This genomic information can provide insights into its metabolic pathways and enzymatic capabilities, especially pertaining to agar degradation. The breakdown of agar not only contributes to the recycling of organic materials in marine environments but also supports the growth of other microorganisms that rely on simpler compounds generated from this process. In ecological terms, the ability of Marinomonas agarivorans to utilize agar as a carbon source highlights its role in the decomposition of marine plant matter. This process is vital for the health of marine ecosystems, as it facilitates nutrient availability for various marine organisms. By breaking down complex polysaccharides, Marinomonas agarivorans contributes to the overall biodiversity and stability of marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusMarinomonas
SpeciesMarinomonas agarivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinomonas agarivorans strain QM202 Qm202_contig_163, whole

Gene Summary

Adenine Count

945871 bp

Thymine Count

950509 bp

Guanine Count

672118 bp

Cytosine Count

666916 bp

Genome Length

3235607 bp

Protein-coding Genes

2970 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate abc transporter substrate-binding proteinCBF23_013325Not AvailableNegative2829295 - 283056346930.3
glycoside hydrolase family 2 proteinCBF23_013330Not AvailableNegative2830802 - 283324692412.1
glycosyl hydrolaseCBF23_013335Not AvailableNegative2833338 - 283442040958.9
hypothetical proteinCBF23_013340Not AvailablePositive2834923 - 283625148448.0
exem/nuch family extracellular endonucleaseCBF23_013345Not AvailablePositive2836788 - 283923287497.2
5-carboxymethyl-2-hydroxymuconate delta-isomeraseCBF23_013350Not AvailablePositive2839351 - 283970113191.0
atp-dependent rna helicase hrpaCBF23_013355Not AvailablePositive2839748 - 2843725152288.0
vacj family lipoproteinCBF23_013360Not AvailablePositive2843738 - 284457730913.4
glutathione transferaseCBF23_013365Not AvailablePositive2844645 - 284504315153.1
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseCBF23_013370Not AvailableNegative2845448 - 284757479886.2

Displaying genes 2651 – 2660 of 3044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.