Marinomonas agarivorans

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Marinomonas

Description

Marinomonas agarivorans is a marine bacterium notable for its unique ability to degrade agar, a polysaccharide derived from red algae. This trait positions it as an important organism in marine ecosystems, particularly in nutrient cycling. The species is characterized by having a single replicon, which simplifies its genetic architecture and may impact its adaptability and evolutionary processes. The genome of Marinomonas agarivorans has been sequenced and is accessible under the accession number NHNK00000000.2. This genomic information can provide insights into its metabolic pathways and enzymatic capabilities, especially pertaining to agar degradation. The breakdown of agar not only contributes to the recycling of organic materials in marine environments but also supports the growth of other microorganisms that rely on simpler compounds generated from this process. In ecological terms, the ability of Marinomonas agarivorans to utilize agar as a carbon source highlights its role in the decomposition of marine plant matter. This process is vital for the health of marine ecosystems, as it facilitates nutrient availability for various marine organisms. By breaking down complex polysaccharides, Marinomonas agarivorans contributes to the overall biodiversity and stability of marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusMarinomonas
SpeciesMarinomonas agarivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinomonas agarivorans strain QM202 Qm202_contig_163, whole

Gene Summary

Adenine Count

945871 bp

Thymine Count

950509 bp

Guanine Count

672118 bp

Cytosine Count

666916 bp

Genome Length

3235607 bp

Protein-coding Genes

2970 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iii subunit gamma/tauCBF23_013275Not AvailablePositive2819144 - 282149886243.7
ybab/ebfc family nucleoid-associated proteinCBF23_013280Not AvailablePositive2821513 - 282183911957.5
recombination protein recrCBF23_013285Not AvailablePositive2821964 - 282256321693.1
ribonuclease dCBF23_013290Not AvailablePositive2822563 - 282370243818.4
ycgl domain-containing proteinCBF23_013295Not AvailablePositive2823768 - 282406411167.6
ycgn family cysteine cluster proteinCBF23_013300Not AvailablePositive2824065 - 282454118389.8
vwa domain-containing proteinCBF23_013305Not AvailablePositive2824668 - 282650368334.6
class ii glutamine amidotransferaseCBF23_013310Not AvailablePositive2826560 - 282734229071.4
carbohydrate abc transporter permeaseCBF23_013315Not AvailableNegative2827455 - 282835433207.0
sugar abc transporter permeaseCBF23_013320Not AvailableNegative2828363 - 282913327922.4

Displaying genes 2641 – 2650 of 3044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.