Marinomonas agarivorans

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Marinomonas

Description

Marinomonas agarivorans is a marine bacterium notable for its unique ability to degrade agar, a polysaccharide derived from red algae. This trait positions it as an important organism in marine ecosystems, particularly in nutrient cycling. The species is characterized by having a single replicon, which simplifies its genetic architecture and may impact its adaptability and evolutionary processes. The genome of Marinomonas agarivorans has been sequenced and is accessible under the accession number NHNK00000000.2. This genomic information can provide insights into its metabolic pathways and enzymatic capabilities, especially pertaining to agar degradation. The breakdown of agar not only contributes to the recycling of organic materials in marine environments but also supports the growth of other microorganisms that rely on simpler compounds generated from this process. In ecological terms, the ability of Marinomonas agarivorans to utilize agar as a carbon source highlights its role in the decomposition of marine plant matter. This process is vital for the health of marine ecosystems, as it facilitates nutrient availability for various marine organisms. By breaking down complex polysaccharides, Marinomonas agarivorans contributes to the overall biodiversity and stability of marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusMarinomonas
SpeciesMarinomonas agarivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinomonas agarivorans strain QM202 Qm202_contig_163, whole

Gene Summary

Adenine Count

945871 bp

Thymine Count

950509 bp

Guanine Count

672118 bp

Cytosine Count

666916 bp

Genome Length

3235607 bp

Protein-coding Genes

2970 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xre family transcriptional regulatorCBF23_005295Not AvailableNegative1135952 - 113632313357.6
atp-dependent clp protease atp-binding subunit clpaCBF23_005300Not AvailableNegative1136538 - 113878482543.9
atp-dependent clp protease adapter clpsCBF23_005305Not AvailableNegative1138806 - 113915013028.8
cold-shock proteinCBF23_005310Not AvailablePositive1139550 - 113986711409.1
pseudouridine synthaseCBF23_005315Not AvailablePositive1139987 - 114062524405.6
nudix domain-containing proteinCBF23_005320Not AvailablePositive1140633 - 114101314216.8
trna 2-thiouridine(34) synthase mnmaCBF23_005325Not AvailablePositive1141155 - 114231542910.8
lysogenization regulator hfldCBF23_005330Not AvailablePositive1142406 - 114300822497.6
adenylosuccinate lyaseCBF23_005335Not AvailablePositive1143195 - 114456850177.0
cupin domain-containing proteinCBF23_005340Not AvailablePositive1144659 - 114585245633.4

Displaying genes 1061 – 1070 of 3044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.