Amycolatopsis sp. AA4

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. AA4 is a bacterial species characterized by the presence of flagella, which suggests motility and the potential to navigate through various environments. This trait may play a role in its ecological interactions and adaptability. The genome of Amycolatopsis sp. AA4 is complex, containing three replicons, indicating a level of genomic organization that may be beneficial for its survival and function in diverse habitats. Multiple replicons can facilitate the regulation of gene expression and the maintenance of genetic stability, which are advantageous for microbial adaptation. The genetic information for Amycolatopsis sp. AA4 is accessible through several accession numbers: NZ_CP024896.1, NZ_CP024894.1, and NZ_CP024895.1. These accessions are crucial for researchers seeking to study the genetic makeup, evolutionary relationships, or biotechnological applications of this organism. In summary, the presence of flagella and the multi-replicon nature of Amycolatopsis sp. AA4 suggest its potential for motility and adaptability in various ecological niches. This adaptability may enable it to play a significant role in its environment, potentially influencing microbial communities and contributing to nutrient cycling.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. AA4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. AA4 chromosome, complete genome.

Gene Summary

Adenine Count

1330480 bp

Thymine Count

1331239 bp

Guanine Count

3076833 bp

Cytosine Count

3061627 bp

Genome Length

8800179 bp

Protein-coding Genes

8132 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrate/nitrite transporterCU254_RS04025Not AvailablePositive800275 - 80161247245.0
nitrite reductase large subunit nirbCU254_RS04030Not AvailablePositive801614 - 80411888209.2
nitrite reductase small subunit nirdCU254_RS04035Not AvailablePositive804115 - 80444711314.4
uroporphyrinogen-iii synthaseCU254_RS04040Not AvailablePositive804444 - 80557138854.0
formylglycine-generating enzyme family proteinCU254_RS04045Not AvailablePositive805582 - 80619623060.7
squalene cyclaseCU254_RS04050Not AvailableNegative806193 - 80714335851.8
winged helix dna-binding domain-containing proteinCU254_RS04055Not AvailableNegative807165 - 80828340402.5
duf3224 domain-containing proteinCU254_RS04060Not AvailableNegative808295 - 80869013948.0
helix-turn-helix transcriptional regulatorCU254_RS04065Not AvailablePositive808753 - 80973035977.1
uroporphyrinogen-iii synthaseCU254_RS04070Not AvailablePositive809915 - 81072127650.2

Displaying genes 851 – 860 of 8594 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0015689AmychelinC30H42N8O14Chemical structure of AmychelinNULL
Average738.708Da
Monoisotopic738.282048064Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.