Amycolatopsis sp. AA4

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. AA4 is a bacterial species characterized by the presence of flagella, which suggests motility and the potential to navigate through various environments. This trait may play a role in its ecological interactions and adaptability. The genome of Amycolatopsis sp. AA4 is complex, containing three replicons, indicating a level of genomic organization that may be beneficial for its survival and function in diverse habitats. Multiple replicons can facilitate the regulation of gene expression and the maintenance of genetic stability, which are advantageous for microbial adaptation. The genetic information for Amycolatopsis sp. AA4 is accessible through several accession numbers: NZ_CP024896.1, NZ_CP024894.1, and NZ_CP024895.1. These accessions are crucial for researchers seeking to study the genetic makeup, evolutionary relationships, or biotechnological applications of this organism. In summary, the presence of flagella and the multi-replicon nature of Amycolatopsis sp. AA4 suggest its potential for motility and adaptability in various ecological niches. This adaptability may enable it to play a significant role in its environment, potentially influencing microbial communities and contributing to nutrient cycling.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. AA4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. AA4 chromosome, complete genome.

Gene Summary

Adenine Count

1330480 bp

Thymine Count

1331239 bp

Guanine Count

3076833 bp

Cytosine Count

3061627 bp

Genome Length

8800179 bp

Protein-coding Genes

8132 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anti-sigma factor family proteinCU254_RS03765Not AvailablePositive751510 - 75217822058.2
s1c family serine proteaseCU254_RS03775Not AvailablePositive752619 - 75415151247.3
sec-independent protein translocase protein tatbCU254_RS03780Not AvailablePositive754351 - 75477915571.5
hypothetical proteinCU254_RS03785Not AvailablePositive754891 - 75539716711.5
mrp/nbp35 family atp-binding proteinCU254_RS03790Not AvailableNegative755458 - 75660340036.7
duf1003 domain-containing proteinCU254_RS03795Not AvailableNegative756629 - 75712618936.6
magnesium transporter mgte n-terminal domain-containing proteinCU254_RS03800Not AvailableNegative757119 - 75842947374.7
aminoglycoside phosphotransferase family proteinCU254_RS03805Not AvailableNegative758487 - 75939233133.2
slipin family proteinCU254_RS03810Not AvailablePositive759488 - 76037232028.6
duf4190 domain-containing proteinCU254_RS03815Not AvailableNegative760357 - 76095019823.5

Displaying genes 801 – 810 of 8594 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0015689AmychelinC30H42N8O14Chemical structure of AmychelinNULL
Average738.708Da
Monoisotopic738.282048064Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.