Sphingobium sp. 66-54

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. 66-54 is a bacterial strain characterized by the presence of flagella, indicating its motility capabilities. This trait allows the organism to navigate its environment, which can be important for nutrient acquisition and colonization in diverse habitats. The strain possesses a single replicon, suggesting a streamlined genomic organization that may contribute to its adaptability and efficiency in various ecological niches. The genomic data for Sphingobium sp. 66-54 is cataloged under the accession number MKWI00000000.1, providing a reference point for researchers interested in studying its genetic characteristics and potential applications in biotechnology or environmental science. Ecologically, the motility afforded by its flagella may enhance the bacterium's ability to thrive in environments where it can exploit specific resources, such as contaminated sites where it might play a role in bioremediation. The unique traits of Sphingobium sp. 66-54 position it as a potentially significant organism for further studies on microbial ecology and environmental applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. 66-54
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingobium sp. 66-54 SCNpilot_expt_1000_bf_scaffold_941,

Gene Summary

Adenine Count

686483 bp

Thymine Count

687365 bp

Guanine Count

1302109 bp

Cytosine Count

1319894 bp

Genome Length

3996113 bp

Protein-coding Genes

3657 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
subtype ii crispr-associated endonuclease cas1BGP16_13875Not AvailableNegative136751 - 13769233751.7
type ii crispr rna-guided endonuclease cas9BGP16_13880Not AvailableNegative137702 - 140926120889.0
monovalent cation/h+ antiporter subunit aBGP16_13885Not AvailablePositive141718 - 144645104955.0
5s ribosomal rnaNot AvailableNot AvailablePositive142009 - 142123Not Available
na+/h+ antiporter subunit cBGP16_13890Not AvailablePositive144645 - 14498911917.7
monovalent cation/h+ antiporter subunit dBGP16_13895Not AvailablePositive144998 - 14660856413.1
na+/h+ antiporter subunit eBGP16_13900Not AvailablePositive146605 - 14708717936.9
k+/h+ antiporter subunit fBGP16_13905Not AvailablePositive147084 - 1473659911.69
cation:proton antiporterBGP16_13910Not AvailablePositive147365 - 14775413828.1
hypothetical proteinBGP16_13915Not AvailablePositive147868 - 14943054495.6

Displaying genes 231 – 240 of 3761 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.