Rhodanobacter sp. 67-28

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Rhodanobacter

Description

Rhodanobacter sp. 67-28 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for possessing a single replicon, which is a distinguishing feature within its genomic structure. The genomic information of Rhodanobacter sp. 67-28 is cataloged under the accession number MKTU00000000.1, providing a reference for further studies on its genetic composition and functional capabilities. The classification of Rhodanobacter as a Gram-negative organism suggests that it possesses a unique cell wall structure, characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural aspect is crucial for understanding its interactions in various environments, particularly in relation to its ecological roles. Biologically, members of the Rhodanobacter genus are often associated with the biogeochemical cycling of sulfur and nitrogen compounds in soil and sediment environments. This ecological insight highlights the potential significance of Rhodanobacter sp. 67-28 in nutrient cycling processes, which could influence soil health and fertility. Its specific traits and the genomic data available could serve as a foundation for further exploration into its ecological functions and applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusRhodanobacter
SpeciesRhodanobacter sp. 67-28
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Rhodanobacter sp. 67-28 SCNpilot_expt_300_bf_scaffold_954,

Gene Summary

Adenine Count

662645 bp

Thymine Count

662310 bp

Guanine Count

1372837 bp

Cytosine Count

1378340 bp

Genome Length

4077861 bp

Protein-coding Genes

3517 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prepilin peptidaseBGO50_10340Not AvailablePositive1744442 - 174520127475.4
dephospho-coa kinaseBGO50_10345Not AvailablePositive1745198 - 174581222103.5
transposaseBGO50_10350Not AvailablePositive1745982 - 174650920520.2
nudix hydrolaseBGO50_10355Not AvailableNegative1746563 - 174693713686.7
diacylglycerol kinaseBGO50_10360Not AvailableNegative1746952 - 174744018134.7
thymidylate synthaseBGO50_10365Not AvailableNegative1747532 - 174834730528.7
tigr00266 family proteinBGO50_10370Not AvailablePositive1748477 - 174948735284.5
prolipoprotein diacylglyceryl transferaseBGO50_10375Not AvailableNegative1749632 - 175051633026.8
hypothetical proteinBGO50_10380Not AvailableNegative1750708 - 175121118491.3
dehydrogenaseBGO50_10385Not AvailableNegative1751213 - 175207628762.3

Displaying genes 1511 – 1520 of 3566 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.