Betaproteobacteria bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Family

Genus

Description

Betaproteobacteria is a class of bacteria that plays a significant role in various ecological niches, particularly in the rhizosphere, the region of soil that is directly influenced by plant roots. This environment is crucial for plant health as it is rich in nutrients and microbial activity. The Betaproteobacteria bacterium of interest has a distinctive genomic structure characterized by the presence of three replicons. This feature may influence its adaptability and survival in the complex microbial community of the rhizosphere. The bacterium has been cataloged under several genetic accessions, including PQAI00000000.1, RPOR00000000.1, and QBLZ00000000.1, which provide a basis for its identification and further genomic analysis. The ecological implications of Betaproteobacteria in the rhizosphere are noteworthy. These bacteria can interact with plant roots, potentially influencing nutrient uptake and contributing to the overall health of the plant. Their presence in the rhizosphere may enhance soil fertility and promote plant growth by participating in nitrogen fixation or organic matter decomposition. Additionally, by competing with pathogenic microbes, Betaproteobacteria may play a protective role for plants, contributing to a balanced microbial community that fosters plant resilience. In summary, the Betaproteobacteria bacterium, with its unique genomic composition and habitat in the rhizosphere, underscores the intricate relationships between soil microbes and plant health, highlighting the importance of understanding these interactions for sustainable agricultural practices.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Betaproteobacteria bacterium isolate concoct.173

Gene Summary

Adenine Count

605156 bp

Thymine Count

604325 bp

Guanine Count

1024281 bp

Cytosine Count

1024363 bp

Genome Length

3271805 bp

Protein-coding Genes

3256 genes

Non-Coding Genes

30 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavocytochrome cEHM16_00250Not AvailableNegative43799 - 4507044912.1
cytochrome cEHM16_00255Not AvailableNegative45080 - 4541511726.0
atp-dependent clp protease atp-binding subunit clpaEHM16_00260Not AvailableNegative45549 - 4781082356.3
atp-dependent clp protease adapter clpsEHM16_00265Not AvailableNegative47843 - 4815111776.4
cold-shock proteinEHM16_00270Not AvailablePositive48464 - 486677259.48
hypothetical proteinEHM16_00275Not AvailablePositive48966 - 5034251102.7
malate synthase aEHM16_00280Not AvailablePositive50662 - 5229060715.9
pseudouridine synthaseEHM16_00285Not AvailablePositive52364 - 5299323037.7
hypothetical proteinEHM16_00290Not AvailablePositive53140 - 533226528.94
hypothetical proteinEHM16_00295Not AvailablePositive53415 - 536337747.59

Displaying genes 51 – 60 of 9520 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.