Candidatus Planktophila dulcis

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Candidatus Nanopelagicales

Family

Candidatus Nanopelagicaceae

Genus

Candidatus Planktophila

Description

Candidatus Planktophila dulcis is a bacterium characterized by a single replicon, which indicates a streamlined genome structure that may contribute to its ecological efficiency. The organism is cataloged under the accession number NZ_CP016772.1, providing a reference for further genetic and taxonomic studies. The presence of only one replicon suggests that Candidatus Planktophila dulcis may exhibit a simplified genomic architecture, potentially reflecting adaptations to specific environments or lifestyles. This reduced complexity can facilitate rapid replication and efficient resource utilization, advantageous traits in competitive aquatic ecosystems. Understanding Candidatus Planktophila dulcis is important for ecological insights, particularly in freshwater environments where it is likely to be found. Its streamlined genome may position it as a key player in nutrient cycling, particularly in the processing of organic matter. This bacterium could contribute to the dynamics of microbial communities, influencing trophic interactions and nutrient availability in aquatic ecosystems. In summary, Candidatus Planktophila dulcis, with its single replicon and documented accession number, exemplifies a microbial entity that may be optimized for life in specific niches within freshwater environments, thereby playing a significant role in ecological processes. Further research into its specific functions and interactions within its habitat could enhance our understanding of microbial ecology and the contributions of such organisms to ecosystem health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderCandidatus Nanopelagicales
FamilyCandidatus Nanopelagicaceae
GenusCandidatus Planktophila
SpeciesCandidatus Planktophila dulcis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Planktophila dulcis isolate MMS-IA-53 chromosome,

Gene Summary

Adenine Count

356594 bp

Thymine Count

354203 bp

Guanine Count

327630 bp

Cytosine Count

327507 bp

Genome Length

1365934 bp

Protein-coding Genes

1367 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gamma-aminobutyraldehyde dehydrogenaseA1sIA53_RS04585Not AvailableNegative906878 - 90830550906.8
dinb family proteinA1sIA53_RS04590Not AvailableNegative908309 - 90878817638.4
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnA1sIA53_RS04595Not AvailableNegative908803 - 90993041222.2
phosphatidate cytidylyltransferaseA1sIA53_RS04600Not AvailableNegative909927 - 91078730350.9
ribosome recycling factorA1sIA53_RS04605Not AvailableNegative910813 - 91137620826.0
ump kinaseA1sIA53_RS04610Not AvailableNegative911421 - 91214325524.0
translation elongation factor tsA1sIA53_RS04615Not AvailableNegative912211 - 91303829622.4
30s ribosomal protein s2A1sIA53_RS04620Not AvailableNegative913044 - 91384129323.8
tyrosine recombinase xercA1sIA53_RS04625Not AvailableNegative914089 - 91500033399.9
hypothetical proteinA1sIA53_RS04630Not AvailablePositive915083 - 9153198865.41

Displaying genes 921 – 930 of 1413 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.