Candidatus Planktophila dulcis

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Candidatus Nanopelagicales

Family

Candidatus Nanopelagicaceae

Genus

Candidatus Planktophila

Description

Candidatus Planktophila dulcis is a bacterium characterized by a single replicon, which indicates a streamlined genome structure that may contribute to its ecological efficiency. The organism is cataloged under the accession number NZ_CP016772.1, providing a reference for further genetic and taxonomic studies. The presence of only one replicon suggests that Candidatus Planktophila dulcis may exhibit a simplified genomic architecture, potentially reflecting adaptations to specific environments or lifestyles. This reduced complexity can facilitate rapid replication and efficient resource utilization, advantageous traits in competitive aquatic ecosystems. Understanding Candidatus Planktophila dulcis is important for ecological insights, particularly in freshwater environments where it is likely to be found. Its streamlined genome may position it as a key player in nutrient cycling, particularly in the processing of organic matter. This bacterium could contribute to the dynamics of microbial communities, influencing trophic interactions and nutrient availability in aquatic ecosystems. In summary, Candidatus Planktophila dulcis, with its single replicon and documented accession number, exemplifies a microbial entity that may be optimized for life in specific niches within freshwater environments, thereby playing a significant role in ecological processes. Further research into its specific functions and interactions within its habitat could enhance our understanding of microbial ecology and the contributions of such organisms to ecosystem health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderCandidatus Nanopelagicales
FamilyCandidatus Nanopelagicaceae
GenusCandidatus Planktophila
SpeciesCandidatus Planktophila dulcis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Planktophila dulcis isolate MMS-IA-53 chromosome,

Gene Summary

Adenine Count

356594 bp

Thymine Count

354203 bp

Guanine Count

327630 bp

Cytosine Count

327507 bp

Genome Length

1365934 bp

Protein-coding Genes

1367 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseA1sIA53_RS02795Not AvailablePositive546528 - 54791948244.7
phospho-n-acetylmuramoyl-pentapeptide- transferaseA1sIA53_RS02800Not AvailablePositive547916 - 54897437123.3
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseA1sIA53_RS02805Not AvailablePositive548981 - 55037850084.1
putative lipid ii flippase ftswA1sIA53_RS02810Not AvailablePositive550368 - 55153141288.8
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseA1sIA53_RS02815Not AvailablePositive551528 - 55261037758.5
udp-n-acetylmuramate--l-alanine ligaseA1sIA53_RS02820Not AvailablePositive552611 - 55398448450.8
cell division protein ftsq/divibA1sIA53_RS02825Not AvailablePositive553977 - 55464824100.3
cell division protein ftszA1sIA53_RS02830Not AvailablePositive554841 - 55596838803.7
peptidoglycan editing factor pgefA1sIA53_RS02835Not AvailablePositive555987 - 55664923172.6
yggs family pyridoxal phosphate-dependent enzymeA1sIA53_RS02840Not AvailablePositive556646 - 55729022962.3

Displaying genes 561 – 570 of 1413 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.