Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Candidatus Nanopelagicales
Family
Candidatus Nanopelagicaceae
Genus
Candidatus Planktophila
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Candidatus Nanopelagicales |
| Family | Candidatus Nanopelagicaceae |
| Genus | Candidatus Planktophila |
| Species | Candidatus Planktophila vernalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
370500 bp
Thymine Count
369528 bp
Guanine Count
312308 bp
Cytosine Count
311668 bp
Genome Length
1364004 bp
Protein-coding Genes
1373 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | A7sIIA15_RS02500 | Not Available | Positive | 467135 - 468307 | 42450.7 |
| abc transporter atp-binding protein | A7sIIA15_RS02505 | Not Available | Positive | 468307 - 469455 | 42315.6 |
| abc transporter permease | A7sIIA15_RS02510 | Not Available | Positive | 469457 - 470311 | 30981.3 |
| abc transporter permease | A7sIIA15_RS02515 | Not Available | Positive | 470308 - 471144 | 30534.0 |
| nad(p)/fad-dependent oxidoreductase | A7sIIA15_RS02520 | Not Available | Positive | 471275 - 472687 | 53235.5 |
| agmatinase | A7sIIA15_RS02525 | Not Available | Positive | 472710 - 473708 | 35819.9 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | A7sIIA15_RS02530 | Not Available | Positive | 473709 - 474854 | 39923.8 |
| m50 family metallopeptidase | A7sIIA15_RS02535 | Not Available | Positive | 474854 - 475999 | 40608.2 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | A7sIIA15_RS02540 | Not Available | Positive | 476032 - 477183 | 40266.9 |
| proline--trna ligase | A7sIIA15_RS02545 | Not Available | Positive | 477193 - 478917 | 62637.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
