Candidatus Planktophila vernalis

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Candidatus Nanopelagicales

Family

Candidatus Nanopelagicaceae

Genus

Candidatus Planktophila

Description

Candidatus Planktophila vernalis is a unique organism characterized by having a single replicon, which distinguishes it within its taxonomic group. The genome of this organism is available under the accession number NZ_CP016776.1, providing a resource for further study and analysis. As a member of the microbial community, Candidatus Planktophila vernalis is likely involved in various ecological processes. Its single replicon structure may influence its genetic stability and adaptability to environmental changes. This trait might also play a role in the organism's replication and metabolic efficiency, although specific metabolic pathways or ecological roles are not detailed in the provided evidence. The presence of Candidatus Planktophila vernalis in aquatic environments suggests that it may contribute to the dynamics of planktonic communities. Understanding its genetic composition and ecological interactions could provide insights into nutrient cycling and energy flow within these ecosystems. In summary, Candidatus Planktophila vernalis, with its single replicon and documented genomic information, represents an important component of microbial diversity in aquatic habitats. The study of its genomic features may enhance our understanding of microbial ecology and evolutionary adaptations in response to environmental pressures.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderCandidatus Nanopelagicales
FamilyCandidatus Nanopelagicaceae
GenusCandidatus Planktophila
SpeciesCandidatus Planktophila vernalis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Planktophila vernalis isolate MMS-IIA-15 chromosome,

Gene Summary

Adenine Count

370500 bp

Thymine Count

369528 bp

Guanine Count

312308 bp

Cytosine Count

311668 bp

Genome Length

1364004 bp

Protein-coding Genes

1373 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunitA7sIIA15_RS01305Not AvailablePositive233415 - 237077134211.0
s26 family signal peptidaseA7sIIA15_RS01310Not AvailableNegative237074 - 23740312165.8
superoxide dismutase, niA7sIIA15_RS01315Not AvailablePositive237486 - 23787514373.1
thioesterase family proteinA7sIIA15_RS01320Not AvailableNegative237872 - 23827614480.6
anti-sigma factor family proteinA7sIIA15_RS01325Not AvailableNegative238302 - 23870615078.7
sigma-70 family rna polymerase sigma factorA7sIIA15_RS01330Not AvailableNegative238703 - 23933823843.8
sos response-associated peptidaseA7sIIA15_RS01335Not AvailableNegative239357 - 24009427378.3
3-phosphoshikimate 1-carboxyvinyltransferaseA7sIIA15_RS01340Not AvailablePositive240149 - 24145345782.2
ribosome small subunit-dependent gtpase aA7sIIA15_RS01345Not AvailablePositive241469 - 24249136386.2
inositol monophosphatase family proteinA7sIIA15_RS01350Not AvailablePositive242542 - 24333928326.5

Displaying genes 261 – 270 of 1419 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.