Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Candidatus Nanopelagicales
Family
Candidatus Nanopelagicaceae
Genus
Candidatus Planktophila
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Candidatus Nanopelagicales |
| Family | Candidatus Nanopelagicaceae |
| Genus | Candidatus Planktophila |
| Species | Candidatus Planktophila vernalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
370500 bp
Thymine Count
369528 bp
Guanine Count
312308 bp
Cytosine Count
311668 bp
Genome Length
1364004 bp
Protein-coding Genes
1373 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit | A7sIIA15_RS01305 | Not Available | Positive | 233415 - 237077 | 134211.0 |
| s26 family signal peptidase | A7sIIA15_RS01310 | Not Available | Negative | 237074 - 237403 | 12165.8 |
| superoxide dismutase, ni | A7sIIA15_RS01315 | Not Available | Positive | 237486 - 237875 | 14373.1 |
| thioesterase family protein | A7sIIA15_RS01320 | Not Available | Negative | 237872 - 238276 | 14480.6 |
| anti-sigma factor family protein | A7sIIA15_RS01325 | Not Available | Negative | 238302 - 238706 | 15078.7 |
| sigma-70 family rna polymerase sigma factor | A7sIIA15_RS01330 | Not Available | Negative | 238703 - 239338 | 23843.8 |
| sos response-associated peptidase | A7sIIA15_RS01335 | Not Available | Negative | 239357 - 240094 | 27378.3 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | A7sIIA15_RS01340 | Not Available | Positive | 240149 - 241453 | 45782.2 |
| ribosome small subunit-dependent gtpase a | A7sIIA15_RS01345 | Not Available | Positive | 241469 - 242491 | 36386.2 |
| inositol monophosphatase family protein | A7sIIA15_RS01350 | Not Available | Positive | 242542 - 243339 | 28326.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
