Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Candidatus Nanopelagicales
Family
Candidatus Nanopelagicaceae
Genus
Candidatus Planktophila
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Candidatus Nanopelagicales |
| Family | Candidatus Nanopelagicaceae |
| Genus | Candidatus Planktophila |
| Species | Candidatus Planktophila vernalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
370500 bp
Thymine Count
369528 bp
Guanine Count
312308 bp
Cytosine Count
311668 bp
Genome Length
1364004 bp
Protein-coding Genes
1373 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | A7sIIA15_RS04920 | Not Available | Negative | 936760 - 938406 | 61421.3 |
| glycine betaine abc transporter substrate-binding protein | A7sIIA15_RS04925 | Not Available | Negative | 938485 - 939447 | 33999.8 |
| abc transporter permease | A7sIIA15_RS04930 | Not Available | Negative | 939536 - 941464 | 68232.9 |
| quaternary amine abc transporter atp-binding protein | A7sIIA15_RS04935 | Not Available | Negative | 941464 - 942492 | 37389.3 |
| aldehyde dehydrogenase family protein | A7sIIA15_RS04940 | Not Available | Negative | 942493 - 943977 | 52792.6 |
| trimethylamine methyltransferase family protein | A7sIIA15_RS04945 | Not Available | Negative | 943982 - 945421 | 53179.7 |
| iclr family transcriptional regulator | A7sIIA15_RS04950 | Not Available | Positive | 945556 - 946317 | 27142.9 |
| b12-binding domain-containing protein | A7sIIA15_RS04955 | Not Available | Positive | 946314 - 946979 | 23348.6 |
| methylenetetrahydrofolate reductase c-terminal domain-containing protein | A7sIIA15_RS04960 | Not Available | Positive | 946989 - 947369 | 14310.5 |
| methylenetetrahydrofolate reductase | A7sIIA15_RS04965 | Not Available | Positive | 947369 - 948265 | 32859.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
