Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05518800_6921 | Not Available | Positive | 7360517 - 7361353 | 30012.0 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05518800_6922 | Not Available | Positive | 7361602 - 7363212 | 59785.2 |
| catechol 2,3-dioxygenase | SAMN05518800_6923 | Not Available | Positive | 7363335 - 7364264 | 33567.6 |
| quinol monooxygenase ygin | SAMN05518800_6924 | Not Available | Positive | 7364694 - 7365071 | 13854.3 |
| protein of unknown function | SAMN05518800_6925 | Not Available | Positive | 7365267 - 7366931 | 60789.5 |
| protein of unknown function | SAMN05518800_6926 | Not Available | Positive | 7366944 - 7368305 | 49974.2 |
| transposase | SAMN05518800_6927 | Not Available | Positive | 7368774 - 7369175 | 14284.3 |
| transposase | SAMN05518800_6928 | Not Available | Positive | 7369172 - 7369483 | 11274.8 |
| rhs repeat-associated core domain-containing protein | SAMN05518800_6929 | Not Available | Negative | 7369976 - 7372915 | 104178.0 |
| yd repeat-containing protein | SAMN05518800_6930 | Not Available | Negative | 7372912 - 7374513 | 57187.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
