Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05518800_6667 | Not Available | Positive | 7102222 - 7103064 | 30245.7 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05518800_6668 | Not Available | Positive | 7103081 - 7104040 | 33610.9 |
| cholesterol transport system auxiliary component | SAMN05518800_6669 | Not Available | Positive | 7104067 - 7104753 | 24290.9 |
| hypothetical protein | SAMN05518800_6670 | Not Available | Positive | 7104784 - 7105005 | 7555.48 |
| nad-dependent deacetylase | SAMN05518800_6671 | Not Available | Negative | 7105012 - 7105770 | 27319.9 |
| transcriptional regulator, iclr family | SAMN05518800_6672 | Not Available | Negative | 7105767 - 7106630 | 30576.6 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05518800_6673 | Not Available | Positive | 7106786 - 7107745 | 35179.7 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05518800_6674 | Not Available | Positive | 7107783 - 7109420 | 60219.2 |
| protein of unknown function | SAMN05518800_6675 | Not Available | Positive | 7109426 - 7109626 | 7199.4 |
| homogentisate 1,2-dioxygenase | SAMN05518800_6676 | Not Available | Positive | 7109675 - 7110985 | 48195.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
