Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nad+) | SAMN05518800_6547 | Not Available | Positive | 6960992 - 6962473 | 52143.4 |
| 2-haloacid dehalogenase | SAMN05518800_6548 | Not Available | Positive | 6962690 - 6963355 | 25006.1 |
| glycine/d-amino acid oxidase | SAMN05518800_6549 | Not Available | Positive | 6963387 - 6964679 | 46445.3 |
| peptide/nickel transport system substrate-binding protein | SAMN05518800_6550 | Not Available | Positive | 6964749 - 6966371 | 58518.2 |
| peptide/nickel transport system permease protein | SAMN05518800_6551 | Not Available | Positive | 6966382 - 6967338 | 33815.6 |
| peptide/nickel transport system permease protein | SAMN05518800_6552 | Not Available | Positive | 6967355 - 6968272 | 31541.1 |
| peptide/nickel transport system atp-binding protein | SAMN05518800_6553 | Not Available | Positive | 6968272 - 6969900 | 58745.2 |
| tartrate dehydrogenase/decarboxylase / d-malate dehydrogenase | SAMN05518800_6554 | Not Available | Positive | 6969912 - 6971000 | 39418.0 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05518800_6555 | Not Available | Positive | 6971018 - 6972502 | 52566.8 |
| alginate lyase | SAMN05518800_6556 | Not Available | Negative | 6972518 - 6974755 | 79236.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
