Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein impe | SAMN05518800_6377 | Not Available | Negative | 6763644 - 6764483 | 30913.7 |
| type vi protein secretion system component hcp (secreted cytotoxin) | SAMN05518800_6378 | Not Available | Negative | 6764515 - 6765072 | 20195.8 |
| caspase domain-containing protein | SAMN05518800_6379 | Not Available | Negative | 6765127 - 6767223 | 74791.5 |
| hypothetical protein | SAMN05518800_6380 | Not Available | Negative | 6767220 - 6768392 | 41115.9 |
| hypothetical protein | SAMN05518800_6381 | Not Available | Negative | 6768420 - 6769169 | 27198.4 |
| membrane-bound lytic murein transglycosylase a | SAMN05518800_6382 | Not Available | Negative | 6769193 - 6770815 | 56686.9 |
| serine/threonine protein kinase | SAMN05518800_6383 | Not Available | Negative | 6770871 - 6772766 | 66577.4 |
| type vi secretion system protein impm | SAMN05518800_6384 | Not Available | Negative | 6772914 - 6773561 | 23669.0 |
| type vi secretion system protein impl | SAMN05518800_6385 | Not Available | Negative | 6773558 - 6777160 | 132561.0 |
| type vi secretion system protein impk | SAMN05518800_6386 | Not Available | Negative | 6777157 - 6778506 | 48039.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
