Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase, is4 family | SAMN05518800_6169 | Not Available | Positive | 6538475 - 6538861 | 14919.3 |
| Trna-phe | Not Available | Not Available | Positive | 6539029 - 6539104 | Not Available |
| response regulator receiver domain-containing protein | SAMN05518800_6171 | Not Available | Negative | 6539129 - 6539830 | 25284.4 |
| signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation | SAMN05518800_6172 | Not Available | Negative | 6539923 - 6542253 | 83165.5 |
| protein of unknown function | SAMN05518800_6173 | Not Available | Negative | 6542250 - 6542825 | 21484.8 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN05518800_6174 | Not Available | Negative | 6542872 - 6544380 | 53859.2 |
| lema protein | SAMN05518800_6175 | Not Available | Negative | 6544341 - 6544949 | 21376.8 |
| dna-directed rna polymerase subunit beta' | SAMN05518800_6176 | Not Available | Negative | 6545052 - 6549287 | 154880.0 |
| dna-directed rna polymerase subunit beta | SAMN05518800_6177 | Not Available | Negative | 6549309 - 6553433 | 152868.0 |
| lsu ribosomal protein l12p | SAMN05518800_6178 | Not Available | Negative | 6553728 - 6554102 | 12701.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
