Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| papain-like cysteine protease avrrpt2 | SAMN05518800_5996 | Not Available | Negative | 6348738 - 6349466 | 25776.8 |
| transcriptional regulator, lysr family | SAMN05518800_5997 | Not Available | Positive | 6349674 - 6350618 | 34331.5 |
| hypothetical protein | SAMN05518800_5998 | Not Available | Positive | 6350674 - 6351450 | 28086.4 |
| abc-type transport system, substrate-binding protein | SAMN05518800_5999 | Not Available | Positive | 6351540 - 6353201 | 60498.7 |
| peptide/nickel transport system permease protein | SAMN05518800_6000 | Not Available | Positive | 6353243 - 6354196 | 34684.4 |
| peptide/nickel transport system permease protein | SAMN05518800_6001 | Not Available | Positive | 6354216 - 6355121 | 31831.6 |
| peptide/nickel transport system atp-binding protein | SAMN05518800_6002 | Not Available | Positive | 6355131 - 6356171 | 37618.5 |
| peptide/nickel transport system atp-binding protein | SAMN05518800_6003 | Not Available | Positive | 6356233 - 6357243 | 36336.4 |
| amidase | SAMN05518800_6004 | Not Available | Positive | 6357274 - 6358452 | 40822.7 |
| ureidoglycolate lyase | SAMN05518800_6005 | Not Available | Negative | 6358466 - 6358981 | 18128.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
