Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMN05518800_5905 | Not Available | Positive | 6258565 - 6259308 | 27283.2 |
| protein of unknown function | SAMN05518800_5906 | Not Available | Negative | 6259274 - 6259702 | 15538.5 |
| acyltransferase | SAMN05518800_5907 | Not Available | Positive | 6259703 - 6260581 | 31622.4 |
| phosphatidate cytidylyltransferase | SAMN05518800_5908 | Not Available | Positive | 6260586 - 6261575 | 36746.5 |
| tetratricopeptide repeat-containing protein | SAMN05518800_5909 | Not Available | Negative | 6261582 - 6263645 | 75809.4 |
| holliday junction endonuclease ruvc | SAMN05518800_5910 | Not Available | Positive | 6263796 - 6264344 | 19054.0 |
| glycine hydroxymethyltransferase | SAMN05518800_5911 | Not Available | Negative | 6264346 - 6265668 | 45746.1 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN05518800_5912 | Not Available | Positive | 6265786 - 6266745 | 34274.7 |
| hypothetical protein | SAMN05518800_5913 | Not Available | Negative | 6266752 - 6267231 | 17307.9 |
| hypothetical protein | SAMN05518800_5914 | Not Available | Negative | 6267301 - 6267477 | 6566.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
