Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05518800_5674 | Not Available | Positive | 5997148 - 5998041 | 31949.8 |
| general l-amino acid abc transporter atp-binding protein | SAMN05518800_5675 | Not Available | Positive | 5998051 - 5998833 | 29532.8 |
| protein of unknown function | SAMN05518800_5676 | Not Available | Positive | 5998865 - 5999275 | 14967.0 |
| nitt/taut family transport system atp-binding protein | SAMN05518800_5677 | Not Available | Negative | 5999299 - 6000651 | 49483.0 |
| nitt/taut family transport system permease protein | SAMN05518800_5678 | Not Available | Negative | 6000654 - 6002396 | 63801.0 |
| transcriptional regulator, laci family | SAMN05518800_5679 | Not Available | Negative | 6002536 - 6003567 | 36667.6 |
| catechol 1,2-dioxygenase | SAMN05518800_5680 | Not Available | Positive | 6003720 - 6004586 | 31374.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05518800_5681 | Not Available | Positive | 6004609 - 6005373 | 25642.8 |
| uncharacterized conserved protein, duf849 family | SAMN05518800_5682 | Not Available | Positive | 6005370 - 6006257 | 32071.1 |
| nadph:quinone reductase | SAMN05518800_5683 | Not Available | Positive | 6006261 - 6007268 | 35328.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
