Variovorax sp. YR752

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. YR752 is a rod-shaped bacterium characterized by a single replicon. This organism is notable for its distinct genetic and phenotypic traits, which contribute to its ecological significance. The accession number for Variovorax sp. YR752 is OCMW00000000.1, providing a reference point for researchers seeking to access genomic data related to this strain. The genetic information associated with this accession can facilitate a deeper understanding of the metabolic capacities and ecological roles of Variovorax sp. YR752. Ecologically, members of the genus Variovorax are known for their versatility and ability to thrive in various environments, often playing a role in the degradation of complex organic compounds. This trait suggests that Variovorax sp. YR752 may contribute to bioremediation processes, where microbial activity is harnessed to clean up contaminated environments. Its rod shape may also enhance its motility and adaptability in diverse habitats. In summary, Variovorax sp. YR752, with its rod shape and single replicon, is an organism of interest for environmental microbiology, particularly in studies related to biodegradation and bioremediation. Its genetic data, accessible through the specified accession, can provide insights into its metabolic pathways and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. YR752
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. YR752 genome assembly, contig: Ga0115526_12, whole

Gene Summary

Adenine Count

1272540 bp

Thymine Count

1273563 bp

Guanine Count

2501835 bp

Cytosine Count

2501195 bp

Genome Length

7549133 bp

Protein-coding Genes

6856 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease, protease subunitSAMN05518800_5572Not AvailableNegative5884429 - 588504322240.5
rna polymerase sigma-70 factor, ecf subfamilySAMN05518800_5573Not AvailablePositive5885125 - 588589828192.6
hypothetical proteinSAMN05518800_5574Not AvailablePositive5885956 - 588645618247.9
lipoprotein-releasing system atp-binding proteinSAMN05518800_5575Not AvailableNegative5886461 - 588713824305.4
lipoprotein-releasing system permease proteinSAMN05518800_5576Not AvailableNegative5887131 - 588838745589.2
hypothetical proteinSAMN05518800_5577Not AvailablePositive5888531 - 588949334285.8
exonuclease recjSAMN05518800_5578Not AvailablePositive5889490 - 589121161982.9
diguanylate cyclase (ggdef) domain-containing proteinSAMN05518800_5579Not AvailablePositive5891221 - 589237840799.8
wgr domain-containing protein, predicted dna-binding domain in molrSAMN05518800_5580Not AvailablePositive5892490 - 5896638148071.0
protein of unknown functionSAMN05518800_5581Not AvailablePositive5896635 - 5900069123476.0

Displaying genes 5531 – 5540 of 7002 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.