Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease, protease subunit | SAMN05518800_5572 | Not Available | Negative | 5884429 - 5885043 | 22240.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05518800_5573 | Not Available | Positive | 5885125 - 5885898 | 28192.6 |
| hypothetical protein | SAMN05518800_5574 | Not Available | Positive | 5885956 - 5886456 | 18247.9 |
| lipoprotein-releasing system atp-binding protein | SAMN05518800_5575 | Not Available | Negative | 5886461 - 5887138 | 24305.4 |
| lipoprotein-releasing system permease protein | SAMN05518800_5576 | Not Available | Negative | 5887131 - 5888387 | 45589.2 |
| hypothetical protein | SAMN05518800_5577 | Not Available | Positive | 5888531 - 5889493 | 34285.8 |
| exonuclease recj | SAMN05518800_5578 | Not Available | Positive | 5889490 - 5891211 | 61982.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05518800_5579 | Not Available | Positive | 5891221 - 5892378 | 40799.8 |
| wgr domain-containing protein, predicted dna-binding domain in molr | SAMN05518800_5580 | Not Available | Positive | 5892490 - 5896638 | 148071.0 |
| protein of unknown function | SAMN05518800_5581 | Not Available | Positive | 5896635 - 5900069 | 123476.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
