Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tatd dnase family protein | SAMN05518800_5511 | Not Available | Negative | 5822098 - 5822958 | 31133.4 |
| trypsin-like peptidase domain-containing protein | SAMN05518800_5512 | Not Available | Positive | 5823047 - 5824057 | 34794.6 |
| moxr-like atpase | SAMN05518800_5513 | Not Available | Positive | 5824084 - 5825100 | 37026.2 |
| protein of unknown function duf58 | SAMN05518800_5514 | Not Available | Positive | 5825212 - 5826204 | 37028.7 |
| ca-activated chloride channel family protein | SAMN05518800_5515 | Not Available | Positive | 5826201 - 5827238 | 37410.9 |
| transcriptional regulator, tetr family | SAMN05518800_5516 | Not Available | Negative | 5827222 - 5827866 | 23516.2 |
| phenylacetic acid degradation protein | SAMN05518800_5517 | Not Available | Negative | 5827932 - 5828534 | 21254.7 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN05518800_5518 | Not Available | Positive | 5828686 - 5829489 | 27643.4 |
| acyl-coa thioesterase | SAMN05518800_5519 | Not Available | Positive | 5829493 - 5829948 | 16257.2 |
| phenylacetate-coa ligase | SAMN05518800_5520 | Not Available | Positive | 5829962 - 5831272 | 48159.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
