Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05518800_0390 | Not Available | Negative | 425946 - 426539 | 21471.0 |
| quinol monooxygenase ygin | SAMN05518800_0391 | Not Available | Negative | 426663 - 426971 | 10985.3 |
| manganese transport protein | SAMN05518800_0392 | Not Available | Positive | 427085 - 428410 | 46862.2 |
| hypothetical protein | SAMN05518800_0393 | Not Available | Negative | 428407 - 428745 | 12133.4 |
| thermolysin metallopeptidase, catalytic domain | SAMN05518800_0394 | Not Available | Negative | 428742 - 429827 | 38909.9 |
| transcriptional regulator, lysr family | SAMN05518800_0395 | Not Available | Negative | 429906 - 430835 | 33667.7 |
| tartrate dehydrogenase/decarboxylase / d-malate dehydrogenase | SAMN05518800_0396 | Not Available | Positive | 430950 - 432041 | 39147.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05518800_0397 | Not Available | Positive | 432114 - 433124 | 35089.6 |
| uncharacterized conserved protein ycii, contains a putative active-site phosphohistidine | SAMN05518800_0398 | Not Available | Positive | 433219 - 433509 | 10617.9 |
| hypothetical protein | SAMN05518800_0399 | Not Available | Negative | 433531 - 434589 | 38167.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
