Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethyladenosine transferase | SAMN05518800_0359 | Not Available | Positive | 387841 - 388605 | 28425.7 |
| barstar (barnase inhibitor) | SAMN05518800_0360 | Not Available | Negative | 388895 - 389374 | 18108.5 |
| ribonuclease t1 | SAMN05518800_0361 | Not Available | Negative | 389371 - 389784 | 14998.7 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN05518800_0362 | Not Available | Negative | 389965 - 392313 | 85166.1 |
| membrane protease subunit, stomatin/prohibitin family, contains c-terminal zn-ribbon domain | SAMN05518800_0363 | Not Available | Positive | 392491 - 393540 | 37890.7 |
| protein of unknown function | SAMN05518800_0364 | Not Available | Positive | 393644 - 395122 | 53260.6 |
| protein of unknown function | SAMN05518800_0365 | Not Available | Positive | 395180 - 395398 | 7816.01 |
| spermidine synthase | SAMN05518800_0366 | Not Available | Positive | 395395 - 396951 | 57068.1 |
| flavin containing amine oxidoreductase | SAMN05518800_0367 | Not Available | Positive | 396958 - 398601 | 58745.5 |
| saccharopine dehydrogenase nadp binding domain-containing protein | SAMN05518800_0368 | Not Available | Positive | 398598 - 399740 | 39501.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
