Variovorax sp. YR752

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. YR752 is a rod-shaped bacterium characterized by a single replicon. This organism is notable for its distinct genetic and phenotypic traits, which contribute to its ecological significance. The accession number for Variovorax sp. YR752 is OCMW00000000.1, providing a reference point for researchers seeking to access genomic data related to this strain. The genetic information associated with this accession can facilitate a deeper understanding of the metabolic capacities and ecological roles of Variovorax sp. YR752. Ecologically, members of the genus Variovorax are known for their versatility and ability to thrive in various environments, often playing a role in the degradation of complex organic compounds. This trait suggests that Variovorax sp. YR752 may contribute to bioremediation processes, where microbial activity is harnessed to clean up contaminated environments. Its rod shape may also enhance its motility and adaptability in diverse habitats. In summary, Variovorax sp. YR752, with its rod shape and single replicon, is an organism of interest for environmental microbiology, particularly in studies related to biodegradation and bioremediation. Its genetic data, accessible through the specified accession, can provide insights into its metabolic pathways and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. YR752
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. YR752 genome assembly, contig: Ga0115526_12, whole

Gene Summary

Adenine Count

1272540 bp

Thymine Count

1273563 bp

Guanine Count

2501835 bp

Cytosine Count

2501195 bp

Genome Length

7549133 bp

Protein-coding Genes

6856 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylaseSAMN05518800_0349Not AvailablePositive373230 - 37474154001.3
lysophospholipase, alpha-beta hydrolase superfamilySAMN05518800_0350Not AvailablePositive374738 - 37559530560.6
predicted arabinose efflux permease, mfs familySAMN05518800_0351Not AvailableNegative375567 - 37674841184.2
protein of unknown functionSAMN05518800_0352Not AvailableNegative376745 - 379657107014.0
uncharacterized conserved protein yidb, duf937 familySAMN05518800_0353Not AvailableNegative379763 - 38021514743.7
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylaseSAMN05518800_0354Not AvailableNegative380317 - 38167547245.2
16s rrna (uracil1498-n3)-methyltransferaseSAMN05518800_0355Not AvailableNegative381770 - 38248924966.0
hypothetical proteinSAMN05518800_0356Not AvailableNegative382559 - 38365640745.1
lps-assembly proteinSAMN05518800_0357Not AvailablePositive383892 - 38640893617.8
periplasmic chaperone for outer membrane proteins suraSAMN05518800_0358Not AvailablePositive386430 - 38783651010.2

Displaying genes 461 – 470 of 7002 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.