Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05518800_0349 | Not Available | Positive | 373230 - 374741 | 54001.3 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05518800_0350 | Not Available | Positive | 374738 - 375595 | 30560.6 |
| predicted arabinose efflux permease, mfs family | SAMN05518800_0351 | Not Available | Negative | 375567 - 376748 | 41184.2 |
| protein of unknown function | SAMN05518800_0352 | Not Available | Negative | 376745 - 379657 | 107014.0 |
| uncharacterized conserved protein yidb, duf937 family | SAMN05518800_0353 | Not Available | Negative | 379763 - 380215 | 14743.7 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05518800_0354 | Not Available | Negative | 380317 - 381675 | 47245.2 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN05518800_0355 | Not Available | Negative | 381770 - 382489 | 24966.0 |
| hypothetical protein | SAMN05518800_0356 | Not Available | Negative | 382559 - 383656 | 40745.1 |
| lps-assembly protein | SAMN05518800_0357 | Not Available | Positive | 383892 - 386408 | 93617.8 |
| periplasmic chaperone for outer membrane proteins sura | SAMN05518800_0358 | Not Available | Positive | 386430 - 387836 | 51010.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
