Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | SAMN05518800_0299 | Not Available | Negative | 315309 - 317711 | 87507.4 |
| beta-n-acetylhexosaminidase | SAMN05518800_0300 | Not Available | Negative | 317732 - 319024 | 46853.4 |
| inner membrane protein | SAMN05518800_0301 | Not Available | Negative | 319021 - 320463 | 51906.3 |
| ca-activated chloride channel family protein | SAMN05518800_0302 | Not Available | Positive | 320667 - 322730 | 74961.7 |
| exosortase/archaeosortase family protein | SAMN05518800_0303 | Not Available | Positive | 322757 - 323686 | 33066.4 |
| hypothetical protein | SAMN05518800_0304 | Not Available | Positive | 323667 - 324236 | 21347.6 |
| transglycosylase | SAMN05518800_0305 | Not Available | Positive | 324254 - 325519 | 45906.5 |
| acetyltransferase (gnat) family protein | SAMN05518800_0306 | Not Available | Positive | 325516 - 326286 | 28100.3 |
| hypothetical protein | SAMN05518800_0307 | Not Available | Positive | 326334 - 327227 | 32627.6 |
| ltxxq motif family protein | SAMN05518800_0308 | Not Available | Positive | 327423 - 327989 | 20159.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
