Variovorax sp. YR752

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. YR752 is a rod-shaped bacterium characterized by a single replicon. This organism is notable for its distinct genetic and phenotypic traits, which contribute to its ecological significance. The accession number for Variovorax sp. YR752 is OCMW00000000.1, providing a reference point for researchers seeking to access genomic data related to this strain. The genetic information associated with this accession can facilitate a deeper understanding of the metabolic capacities and ecological roles of Variovorax sp. YR752. Ecologically, members of the genus Variovorax are known for their versatility and ability to thrive in various environments, often playing a role in the degradation of complex organic compounds. This trait suggests that Variovorax sp. YR752 may contribute to bioremediation processes, where microbial activity is harnessed to clean up contaminated environments. Its rod shape may also enhance its motility and adaptability in diverse habitats. In summary, Variovorax sp. YR752, with its rod shape and single replicon, is an organism of interest for environmental microbiology, particularly in studies related to biodegradation and bioremediation. Its genetic data, accessible through the specified accession, can provide insights into its metabolic pathways and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. YR752
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. YR752 genome assembly, contig: Ga0115526_12, whole

Gene Summary

Adenine Count

1272540 bp

Thymine Count

1273563 bp

Guanine Count

2501835 bp

Cytosine Count

2501195 bp

Genome Length

7549133 bp

Protein-coding Genes

6856 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
inosine-uridine nucleoside n-ribohydrolaseSAMN05518800_0129Not AvailableNegative145505 - 14669841764.9
c-terminal processing protease ctpa/prc, contains a pdz domainSAMN05518800_0130Not AvailableNegative146869 - 14850055985.6
aaa+-type atpase, spovk/ycf46/vps4 familySAMN05518800_0131Not AvailableNegative148565 - 15088985832.5
threonine dehydrataseSAMN05518800_0132Not AvailablePositive151002 - 15221042606.8
hypothetical proteinSAMN05518800_0133Not AvailablePositive152330 - 1524825120.47
phosphoenolpyruvate carboxykinase (gtp)SAMN05518800_0134Not AvailablePositive152636 - 15450168404.5
5s ribosomal rna . bacterial tsuNot AvailableNot AvailablePositive154648 - 15476018.01
23s ribosomal rna . bacterial lsuNot AvailableNot AvailablePositive154888 - 15776418.01
Trna-alaNot AvailableNot AvailablePositive158082 - 158157Not Available
Trna-ileNot AvailableNot AvailablePositive158188 - 158264Not Available

Displaying genes 241 – 250 of 7002 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.