Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system (t6ss), amidase effector protein 4 | SAMN05518800_2015 | Not Available | Positive | 2120965 - 2121444 | 18547.1 |
| hypothetical protein | SAMN05518800_2016 | Not Available | Positive | 2121441 - 2121686 | 9099.43 |
| hypothetical protein | SAMN05518800_2018 | Not Available | Positive | 2121991 - 2122308 | 11724.0 |
| hypothetical protein | SAMN05518800_2019 | Not Available | Positive | 2122328 - 2122726 | 14728.5 |
| feruloyl esterase | SAMN05518800_2020 | Not Available | Positive | 2122901 - 2124577 | 58444.7 |
| dna-binding protein hu-beta | SAMN05518800_2021 | Not Available | Positive | 2124771 - 2125061 | 9802.59 |
| nlpc/p60 family protein | SAMN05518800_2022 | Not Available | Positive | 2125183 - 2125710 | 18426.9 |
| ycxb-like protein | SAMN05518800_2023 | Not Available | Positive | 2125722 - 2126249 | 19588.9 |
| protein of unknown function | SAMN05518800_2024 | Not Available | Negative | 2126281 - 2126922 | 22578.7 |
| ompa family protein | SAMN05518800_2025 | Not Available | Negative | 2126951 - 2127604 | 23405.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
