Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix | SAMN05518800_1874 | Not Available | Positive | 1955829 - 1956176 | 12585.0 |
| hypothetical protein | SAMN05518800_1875 | Not Available | Negative | 1956181 - 1956759 | 21205.5 |
| integrase | SAMN05518800_1876 | Not Available | Negative | 1957074 - 1958315 | 46994.4 |
| outer membrane protein (porin) | SAMN05518800_1877 | Not Available | Negative | 1958598 - 1959647 | 36840.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05518800_1878 | Not Available | Negative | 1959784 - 1960755 | 34539.8 |
| smpa / omla family protein | SAMN05518800_1879 | Not Available | Negative | 1960885 - 1961775 | 32188.5 |
| head domain of trimeric autotransporter adhesin | SAMN05518800_1880 | Not Available | Negative | 1961787 - 1966181 | 138582.0 |
| hypothetical protein | SAMN05518800_1881 | Not Available | Positive | 1966619 - 1967446 | 30271.6 |
| 4'-phosphopantetheinyl transferase | SAMN05518800_1882 | Not Available | Negative | 1967447 - 1968238 | 30096.6 |
| hypothetical protein | SAMN05518800_1883 | Not Available | Positive | 1968455 - 1968703 | 9560.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
