Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein impm | SAMN05518800_0059 | Not Available | Negative | 61883 - 62596 | 25860.5 |
| type vi secretion system protein impl | SAMN05518800_0060 | Not Available | Negative | 62598 - 66257 | 135396.0 |
| type vi secretion system protein impk | SAMN05518800_0061 | Not Available | Negative | 66257 - 67657 | 49985.9 |
| type vi secretion system protein impj | SAMN05518800_0062 | Not Available | Negative | 67666 - 69042 | 50766.1 |
| type vi secretion system protein vasd | SAMN05518800_0063 | Not Available | Negative | 69217 - 69735 | 18971.9 |
| hypothetical protein | SAMN05518800_0064 | Not Available | Positive | 69865 - 70272 | 14808.8 |
| fha domain protein | SAMN05518800_0065 | Not Available | Positive | 70331 - 72301 | 69230.9 |
| serine/threonine protein phosphatase prpc | SAMN05518800_0066 | Not Available | Positive | 72294 - 73085 | 28528.4 |
| protein of unknown function | SAMN05518800_0067 | Not Available | Negative | 73098 - 73478 | 13557.0 |
| protein of unknown function | SAMN05518800_0068 | Not Available | Negative | 73494 - 74138 | 22825.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
