Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05518800_1611 | Not Available | Positive | 1710867 - 1712834 | 71128.8 |
| hypothetical protein | SAMN05518800_1612 | Not Available | Negative | 1712859 - 1713071 | 7665.99 |
| cell division protein zapd | SAMN05518800_1613 | Not Available | Negative | 1713068 - 1713823 | 28416.1 |
| hypothetical protein | SAMN05518800_1614 | Not Available | Negative | 1713854 - 1714888 | 38732.3 |
| alginate o-acetyltransferase complex protein algi | SAMN05518800_1615 | Not Available | Negative | 1714890 - 1716383 | 56252.7 |
| dephospho-coa kinase | SAMN05518800_1616 | Not Available | Negative | 1716453 - 1717061 | 21314.9 |
| leader peptidase (prepilin peptidase) / n-methyltransferase | SAMN05518800_1617 | Not Available | Negative | 1717070 - 1718035 | 34430.7 |
| type iv pilus assembly protein pilc | SAMN05518800_1618 | Not Available | Negative | 1718035 - 1719264 | 44753.1 |
| type iv pilus assembly protein pilb | SAMN05518800_1619 | Not Available | Negative | 1719291 - 1721024 | 62524.2 |
| Trna-pro | Not Available | Not Available | Positive | 1721138 - 1721214 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
