Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05518800_1551 | Not Available | Negative | 1647286 - 1648110 | 31151.3 |
| putative spermidine/putrescine transport system permease protein | SAMN05518800_1552 | Not Available | Negative | 1648150 - 1648941 | 27771.6 |
| putative spermidine/putrescine transport system permease protein | SAMN05518800_1553 | Not Available | Negative | 1648938 - 1649789 | 30800.3 |
| iron(iii) transport system atp-binding protein/putative spermidine/putrescine transport system atp-binding protein/spermidine/putrescine transport system atp-binding protein | SAMN05518800_1554 | Not Available | Negative | 1649786 - 1650874 | 38632.5 |
| iron(iii) transport system substrate-binding protein/putative spermidine/putrescine transport system substrate-binding protein | SAMN05518800_1555 | Not Available | Negative | 1650903 - 1651928 | 36599.1 |
| transcriptional regulator, marr family | SAMN05518800_1556 | Not Available | Positive | 1652230 - 1652772 | 19920.2 |
| protein of unknown function | SAMN05518800_1557 | Not Available | Negative | 1652780 - 1654006 | 42870.2 |
| transcriptional regulator, tetr family | SAMN05518800_1558 | Not Available | Positive | 1654140 - 1654766 | 22553.9 |
| transcriptional regulator, asnc family | SAMN05518800_1559 | Not Available | Negative | 1654770 - 1655213 | 16383.9 |
| threonine/homoserine efflux transporter rhta | SAMN05518800_1560 | Not Available | Positive | 1655350 - 1656252 | 31192.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
