Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05518800_1290 | Not Available | Negative | 1388754 - 1389182 | 14732.2 |
| flp pilus assembly protein tadd, contains tpr repeats | SAMN05518800_1291 | Not Available | Negative | 1389179 - 1390069 | 31073.1 |
| tight adherence protein c | SAMN05518800_1292 | Not Available | Negative | 1390066 - 1391022 | 34692.3 |
| tight adherence protein b | SAMN05518800_1293 | Not Available | Negative | 1391019 - 1392023 | 36143.7 |
| pilus assembly protein cpaf | SAMN05518800_1294 | Not Available | Negative | 1392016 - 1393329 | 48709.6 |
| pilus assembly protein cpae | SAMN05518800_1295 | Not Available | Negative | 1393334 - 1394617 | 45591.8 |
| pilus assembly protein cpac | SAMN05518800_1296 | Not Available | Negative | 1394654 - 1396006 | 47435.8 |
| pilus assembly protein cpab | SAMN05518800_1297 | Not Available | Negative | 1396046 - 1397047 | 34600.9 |
| prepilin peptidase cpaa | SAMN05518800_1298 | Not Available | Negative | 1397122 - 1397628 | 18267.9 |
| pilus assembly protein flp/pila | SAMN05518800_1299 | Not Available | Negative | 1397639 - 1397824 | 6468.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
