Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05518800_1238 | Not Available | Negative | 1323328 - 1323621 | 10939.2 |
| rhs repeat-associated core domain-containing protein | SAMN05518800_1239 | Not Available | Negative | 1323628 - 1327497 | 138368.0 |
| integrase | SAMN05518800_1242 | Not Available | Negative | 1329416 - 1330645 | 45453.1 |
| Trna-arg | Not Available | Not Available | Positive | 1330820 - 1330894 | Not Available |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05518800_1244 | Not Available | Positive | 1331125 - 1332144 | 36434.5 |
| tripartite tricarboxylate transporter tctb family protein | SAMN05518800_1245 | Not Available | Positive | 1332269 - 1332790 | 18747.4 |
| putative tricarboxylic transport membrane protein | SAMN05518800_1246 | Not Available | Positive | 1332815 - 1334350 | 54140.2 |
| cytidylate kinase | SAMN05518800_1247 | Not Available | Positive | 1334373 - 1335209 | 30607.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05518800_1248 | Not Available | Negative | 1335375 - 1336022 | 24528.1 |
| oxalyl-coa decarboxylase | SAMN05518800_1249 | Not Available | Positive | 1336137 - 1337963 | 64249.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
