Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, marr family | SAMN05518800_0008 | Not Available | Positive | 6432 - 6869 | 16415.9 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | SAMN05518800_0009 | Not Available | Positive | 6866 - 7492 | 22135.7 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | SAMN05518800_0010 | Not Available | Positive | 7489 - 8262 | 28649.1 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | SAMN05518800_0011 | Not Available | Positive | 8259 - 9722 | 52298.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05518800_0012 | Not Available | Positive | 9719 - 10693 | 34132.3 |
| protocatechuate 4,5-dioxygenase alpha subunit | SAMN05518800_0013 | Not Available | Positive | 10697 - 11032 | 12372.9 |
| 2,3-dihydroxyphenylpropionate 1,2-dioxygenase | SAMN05518800_0014 | Not Available | Positive | 11029 - 11856 | 30192.1 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | SAMN05518800_0015 | Not Available | Positive | 11870 - 12277 | 14952.0 |
| 2-oxohept-3-enedioate hydratase | SAMN05518800_0016 | Not Available | Positive | 12291 - 13094 | 29332.1 |
| 2,4-dihydroxyhept-2-enedioate aldolase | SAMN05518800_0017 | Not Available | Positive | 13110 - 13931 | 28734.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
