Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR752 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1272540 bp
Thymine Count
1273563 bp
Guanine Count
2501835 bp
Cytosine Count
2501195 bp
Genome Length
7549133 bp
Protein-coding Genes
6856 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spore coat protein u (scpu) domain-containing protein | SAMN05518800_0962 | Not Available | Positive | 1005237 - 1005746 | 17136.9 |
| fimbrial chaperone protein | SAMN05518800_0963 | Not Available | Positive | 1005760 - 1006545 | 27901.0 |
| outer membrane usher protein | SAMN05518800_0964 | Not Available | Positive | 1006583 - 1008892 | 80895.5 |
| spore coat protein u domain-containing protein | SAMN05518800_0965 | Not Available | Positive | 1008859 - 1009389 | 17637.1 |
| protein of unknown function | SAMN05518800_0966 | Not Available | Negative | 1009420 - 1009731 | 11560.5 |
| protein of unknown function | SAMN05518800_0967 | Not Available | Negative | 1009846 - 1011072 | 42414.8 |
| fumarylacetoacetate (faa) hydrolase | SAMN05518800_0968 | Not Available | Positive | 1011178 - 1012254 | 38941.3 |
| helix-turn-helix domain-containing protein | SAMN05518800_0969 | Not Available | Positive | 1012418 - 1012660 | 8434.12 |
| serine/threonine-protein kinase hipa | SAMN05518800_0970 | Not Available | Positive | 1012657 - 1013913 | 46732.4 |
| transcriptional regulator, luxr family | SAMN05518800_0971 | Not Available | Negative | 1013953 - 1014729 | 28335.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
