Duganella sp. CF458

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella sp. CF458 is a Gram-negative bacterium characterized by its rod shape. This specific strain exhibits a single replicon, indicating a streamlined genetic configuration. The accession number for this strain is FOOF00000000.1, which provides a unique identifier for researchers looking to access its genomic data. As a member of the Duganella genus, this bacterium is likely to be involved in various ecological processes, although specific ecological roles for Duganella sp. CF458 have not been detailed in the provided traits. Generally, members of the Duganella genus are known to inhabit diverse environments, including soil and water, suggesting potential roles in nutrient cycling and interactions with other microorganisms. The Gram-negative classification of Duganella sp. CF458 implies that it possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may contribute to its resistance to certain antibiotics and influence its environmental interactions. Understanding the characteristics of Duganella sp. CF458 can provide insight into its ecological niche and potential applications in biotechnology or environmental management, such as bioremediation. Further research would be beneficial to elucidate the specific biological and ecological functions of this strain within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella sp. CF458
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella sp. CF458 genome assembly, contig: Ga0115461_161, whole

Gene Summary

Adenine Count

1188786 bp

Thymine Count

1182273 bp

Guanine Count

1981528 bp

Cytosine Count

1988232 bp

Genome Length

6341035 bp

Protein-coding Genes

5668 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate abc transporter substrate-binding protein, cut1 familySAMN05518865_1187Not AvailablePositive5155166 - 515638943870.6
carbohydrate abc transporter membrane protein 1, cut1 familySAMN05518865_1188Not AvailablePositive5156405 - 515722329599.1
carbohydrate abc transporter membrane protein 2, cut1 familySAMN05518865_1189Not AvailablePositive5157220 - 515806530595.6
carbohydrate abc transporter atp-binding protein, cut1 familySAMN05518865_11810Not AvailablePositive5158070 - 515916438711.4
transcriptional regulator, laci familySAMN05518865_11811Not AvailablePositive5159181 - 516021236679.4
broad-specificity cellobiaseSAMN05518865_11812Not AvailablePositive5160293 - 516166050756.7
beta-glucosidaseSAMN05518865_11813Not AvailablePositive5161672 - 516415286788.4
mfs transporter, fhs family, l-fucose permeaseSAMN05518865_11814Not AvailablePositive5164153 - 516541843057.1
tryptophan halogenaseSAMN05518865_11815Not AvailableNegative5165376 - 516689957648.9
cupin-like domain-containing proteinSAMN05518865_11816Not AvailableNegative5166912 - 516794338231.7

Displaying genes 4781 – 4790 of 5181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.