Duganella sp. CF458

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella sp. CF458 is a Gram-negative bacterium characterized by its rod shape. This specific strain exhibits a single replicon, indicating a streamlined genetic configuration. The accession number for this strain is FOOF00000000.1, which provides a unique identifier for researchers looking to access its genomic data. As a member of the Duganella genus, this bacterium is likely to be involved in various ecological processes, although specific ecological roles for Duganella sp. CF458 have not been detailed in the provided traits. Generally, members of the Duganella genus are known to inhabit diverse environments, including soil and water, suggesting potential roles in nutrient cycling and interactions with other microorganisms. The Gram-negative classification of Duganella sp. CF458 implies that it possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may contribute to its resistance to certain antibiotics and influence its environmental interactions. Understanding the characteristics of Duganella sp. CF458 can provide insight into its ecological niche and potential applications in biotechnology or environmental management, such as bioremediation. Further research would be beneficial to elucidate the specific biological and ecological functions of this strain within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella sp. CF458
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella sp. CF458 genome assembly, contig: Ga0115461_161, whole

Gene Summary

Adenine Count

1188786 bp

Thymine Count

1182273 bp

Guanine Count

1981528 bp

Cytosine Count

1988232 bp

Genome Length

6341035 bp

Protein-coding Genes

5668 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
8-oxo-dgtp pyrophosphatase mutt, nudix familySAMN05518865_11766Not AvailableNegative5080152 - 508081424322.1
lsu ribosomal protein l19pSAMN05518865_11767Not AvailableNegative5080889 - 508126914209.3
trna (guanine37-n1)-methyltransferaseSAMN05518865_11768Not AvailableNegative5081373 - 508211927596.4
16s rrna processing protein rimmSAMN05518865_11769Not AvailableNegative5082134 - 508265218916.5
ssu ribosomal protein s16pSAMN05518865_11770Not AvailableNegative5082685 - 50829308911.83
hypothetical proteinSAMN05518865_11771Not AvailablePositive5083117 - 508353314865.5
glycine zipper 2tm domain-containing proteinSAMN05518865_11772Not AvailablePositive5083737 - 508415013907.1
threonine/homoserine/homoserine lactone efflux proteinSAMN05518865_11773Not AvailableNegative5084147 - 508476722029.2
l-proline dehydrogenaseSAMN05518865_11774Not AvailablePositive5084827 - 508581636573.4
peptidoglycan/xylan/chitin deacetylase, pgda/cda1 familySAMN05518865_11775Not AvailablePositive5085813 - 508672133262.2

Displaying genes 4701 – 4710 of 5181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.