Duganella sp. CF458

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella sp. CF458 is a Gram-negative bacterium characterized by its rod shape. This specific strain exhibits a single replicon, indicating a streamlined genetic configuration. The accession number for this strain is FOOF00000000.1, which provides a unique identifier for researchers looking to access its genomic data. As a member of the Duganella genus, this bacterium is likely to be involved in various ecological processes, although specific ecological roles for Duganella sp. CF458 have not been detailed in the provided traits. Generally, members of the Duganella genus are known to inhabit diverse environments, including soil and water, suggesting potential roles in nutrient cycling and interactions with other microorganisms. The Gram-negative classification of Duganella sp. CF458 implies that it possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may contribute to its resistance to certain antibiotics and influence its environmental interactions. Understanding the characteristics of Duganella sp. CF458 can provide insight into its ecological niche and potential applications in biotechnology or environmental management, such as bioremediation. Further research would be beneficial to elucidate the specific biological and ecological functions of this strain within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella sp. CF458
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella sp. CF458 genome assembly, contig: Ga0115461_161, whole

Gene Summary

Adenine Count

1188786 bp

Thymine Count

1182273 bp

Guanine Count

1981528 bp

Cytosine Count

1988232 bp

Genome Length

6341035 bp

Protein-coding Genes

5668 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
stress-induced acidophilic repeat motif-containing proteinSAMN05518865_110130Not AvailableNegative3616556 - 361690012458.8
putative phosphoesteraseSAMN05518865_110131Not AvailableNegative3617032 - 361768823656.8
atp-dependent helicase lhr and lhr-like helicaseSAMN05518865_110132Not AvailableNegative3617685 - 362022593329.6
dna ligase-1SAMN05518865_110133Not AvailableNegative3620222 - 362185360307.4
putative mrna 3-end processing factorSAMN05518865_110134Not AvailableNegative3621846 - 362285937047.3
atp-dependent dna helicase recqSAMN05518865_110135Not AvailableNegative3622862 - 362428652339.6
gaf domain-containing proteinSAMN05518865_110136Not AvailablePositive3624351 - 362486018332.8
hypothetical proteinSAMN05518865_110137Not AvailableNegative3624871 - 36249602993.95
hypothetical proteinSAMN05518865_110138Not AvailableNegative3624953 - 362575327476.5
mode molybdate transport repressor domain-containing proteinSAMN05518865_110139Not AvailablePositive3625806 - 362670532358.4

Displaying genes 3401 – 3410 of 5181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.