Duganella sp. CF458

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella sp. CF458 is a Gram-negative bacterium characterized by its rod shape. This specific strain exhibits a single replicon, indicating a streamlined genetic configuration. The accession number for this strain is FOOF00000000.1, which provides a unique identifier for researchers looking to access its genomic data. As a member of the Duganella genus, this bacterium is likely to be involved in various ecological processes, although specific ecological roles for Duganella sp. CF458 have not been detailed in the provided traits. Generally, members of the Duganella genus are known to inhabit diverse environments, including soil and water, suggesting potential roles in nutrient cycling and interactions with other microorganisms. The Gram-negative classification of Duganella sp. CF458 implies that it possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may contribute to its resistance to certain antibiotics and influence its environmental interactions. Understanding the characteristics of Duganella sp. CF458 can provide insight into its ecological niche and potential applications in biotechnology or environmental management, such as bioremediation. Further research would be beneficial to elucidate the specific biological and ecological functions of this strain within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella sp. CF458
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella sp. CF458 genome assembly, contig: Ga0115461_161, whole

Gene Summary

Adenine Count

1188786 bp

Thymine Count

1182273 bp

Guanine Count

1981528 bp

Cytosine Count

1988232 bp

Genome Length

6341035 bp

Protein-coding Genes

5668 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna pseudouridine synthase bSAMN05518865_10723Not AvailableNegative2572390 - 257331633588.8
ribosome-binding factor aSAMN05518865_10724Not AvailableNegative2573313 - 257377117090.6
translation initiation factor if-2SAMN05518865_10725Not AvailableNegative2573868 - 2576756102662.0
nusa antitermination factorSAMN05518865_10726Not AvailableNegative2576808 - 257837357884.9
ribosome maturation factor rimpSAMN05518865_10727Not AvailableNegative2578370 - 257885817963.5
23s rrna pseudouridine2605 synthaseSAMN05518865_10728Not AvailableNegative2579148 - 258117570372.0
segregation and condensation protein bSAMN05518865_10729Not AvailableNegative2581162 - 258189627123.9
glucokinaseSAMN05518865_10730Not AvailableNegative2582077 - 258308735095.4
membrane protein deda, snare-associated domainSAMN05518865_10731Not AvailableNegative2583324 - 258431335398.5
pas domain s-box-containing proteinSAMN05518865_10732Not AvailableNegative2584343 - 258656581562.8

Displaying genes 2471 – 2480 of 5181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.