Duganella sp. CF458

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella sp. CF458 is a Gram-negative bacterium characterized by its rod shape. This specific strain exhibits a single replicon, indicating a streamlined genetic configuration. The accession number for this strain is FOOF00000000.1, which provides a unique identifier for researchers looking to access its genomic data. As a member of the Duganella genus, this bacterium is likely to be involved in various ecological processes, although specific ecological roles for Duganella sp. CF458 have not been detailed in the provided traits. Generally, members of the Duganella genus are known to inhabit diverse environments, including soil and water, suggesting potential roles in nutrient cycling and interactions with other microorganisms. The Gram-negative classification of Duganella sp. CF458 implies that it possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may contribute to its resistance to certain antibiotics and influence its environmental interactions. Understanding the characteristics of Duganella sp. CF458 can provide insight into its ecological niche and potential applications in biotechnology or environmental management, such as bioremediation. Further research would be beneficial to elucidate the specific biological and ecological functions of this strain within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella sp. CF458
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella sp. CF458 genome assembly, contig: Ga0115461_161, whole

Gene Summary

Adenine Count

1188786 bp

Thymine Count

1182273 bp

Guanine Count

1981528 bp

Cytosine Count

1988232 bp

Genome Length

6341035 bp

Protein-coding Genes

5668 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molybdopterin or thiamine biosynthesis adenylyltransferaseSAMN05518865_103300Not AvailableNegative1420312 - 142118431502.4
putative pep-cterm system tpr-repeat lipoproteinSAMN05518865_103301Not AvailableNegative1421190 - 142397999457.5
hypothetical proteinSAMN05518865_103302Not AvailableNegative1424054 - 142481528324.1
putative pep-cterm system tpr-repeat lipoproteinSAMN05518865_103303Not AvailableNegative1425156 - 142791298194.3
asparagine synthase (glutamine-hydrolysing)SAMN05518865_103304Not AvailableNegative1427935 - 142977667552.7
diaminopimelate decarboxylaseSAMN05518865_103305Not AvailableNegative1429792 - 143103643680.2
acyl-coa ligase (amp-forming), exosortase a-associatedSAMN05518865_103306Not AvailableNegative1431033 - 143261656912.8
predicted atp-dependent carboligase, atp-grasp superfamilySAMN05518865_103307Not AvailablePositive1432754 - 143508186608.4
acyl carrier proteinSAMN05518865_103308Not AvailablePositive1435250 - 14354988705.4
exosortase a system-associated hydrolase 2SAMN05518865_103309Not AvailablePositive1435498 - 143633728819.7

Displaying genes 1371 – 1380 of 5181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.