Cycloclasticus pugetii

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus pugetii is a marine bacterium characterized by its single replicon, which is indicated by its genomic structure. The organism is cataloged in the NCBI database with the accession number FQZJ00000000.1, providing a reference point for genetic and genomic studies. This bacterium is notable for its ecological role, particularly in the degradation of polycyclic aromatic hydrocarbons (PAHs), compounds often found in marine environments as pollutants. Cycloclasticus pugetii contributes to the bioremediation processes, breaking down these complex organic molecules and thus playing a significant role in maintaining the health of marine ecosystems affected by hydrocarbon contamination. Understanding the genetic makeup and functional capabilities of Cycloclasticus pugetii can offer insights into its potential applications in environmental biotechnology, especially in efforts to combat pollution in marine habitats. The study of such organisms is crucial for developing strategies aimed at harnessing their natural abilities to degrade harmful substances, ultimately supporting ecosystem recovery and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus pugetii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cycloclasticus pugetii strain DSM 27168 genome assembly, contig:

Gene Summary

Adenine Count

745157 bp

Thymine Count

739133 bp

Guanine Count

509061 bp

Cytosine Count

547097 bp

Genome Length

2540448 bp

Protein-coding Genes

2391 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polyhydroxyalkanoate synthesis repressor pharSAMN05519226_0361Not AvailableNegative248172 - 24863317760.6
polyribonucleotide nucleotidyltransferaseSAMN05519226_0362Not AvailableNegative248661 - 25072774687.5
ssu ribosomal protein s15pSAMN05519226_0363Not AvailableNegative250755 - 25102410326.5
trna pseudouridine synthase bSAMN05519226_0364Not AvailableNegative251128 - 25203633139.1
ribosome-binding factor aSAMN05519226_0365Not AvailableNegative252040 - 25240513923.8
bacterial translation initiation factor 2 (bif-2)SAMN05519226_0366Not AvailableNegative252416 - 25504994737.4
nusa antitermination factorSAMN05519226_0367Not AvailableNegative255076 - 25657855772.9
ribosome maturation factor rimpSAMN05519226_0368Not AvailableNegative256599 - 25705716977.5
Trna-metNot AvailableNot AvailablePositive257190 - 257266Not Available
phosphatidylglycerophosphataseSAMN05519226_0370Not AvailableNegative257352 - 25783717538.8

Displaying genes 241 – 250 of 360 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.