Cycloclasticus pugetii

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus pugetii is a marine bacterium characterized by its single replicon, which is indicated by its genomic structure. The organism is cataloged in the NCBI database with the accession number FQZJ00000000.1, providing a reference point for genetic and genomic studies. This bacterium is notable for its ecological role, particularly in the degradation of polycyclic aromatic hydrocarbons (PAHs), compounds often found in marine environments as pollutants. Cycloclasticus pugetii contributes to the bioremediation processes, breaking down these complex organic molecules and thus playing a significant role in maintaining the health of marine ecosystems affected by hydrocarbon contamination. Understanding the genetic makeup and functional capabilities of Cycloclasticus pugetii can offer insights into its potential applications in environmental biotechnology, especially in efforts to combat pollution in marine habitats. The study of such organisms is crucial for developing strategies aimed at harnessing their natural abilities to degrade harmful substances, ultimately supporting ecosystem recovery and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus pugetii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cycloclasticus pugetii strain DSM 27168 genome assembly, contig:

Gene Summary

Adenine Count

745157 bp

Thymine Count

739133 bp

Guanine Count

509061 bp

Cytosine Count

547097 bp

Genome Length

2540448 bp

Protein-coding Genes

2391 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
slyx proteinSAMN05519226_0280Not AvailablePositive164950 - 1651567969.28
ras superfamily gtp-binding protein ylqfSAMN05519226_0281Not AvailablePositive165193 - 16611334278.4
sodium/proton antiporter, nhad familySAMN05519226_0282Not AvailablePositive166397 - 16783953007.3
molybdopterin guanine dinucleotide biosynthesis accessory protein mobbSAMN05519226_0283Not AvailablePositive167823 - 16838620735.6
molybdopterin molybdochelataseSAMN05519226_0284Not AvailablePositive168383 - 16960944251.4
udp-galactose 4-epimeraseSAMN05519226_0285Not AvailablePositive169606 - 17059836137.0
aspartate/methionine/tyrosine aminotransferaseSAMN05519226_0286Not AvailableNegative170638 - 17181343526.8
transcriptional regulator, trar/dksa familySAMN05519226_0287Not AvailablePositive171971 - 17241116873.0
glutamyl-q trna(asp) synthetaseSAMN05519226_0288Not AvailablePositive172435 - 17333734187.9
poly(r)-hydroxyalkanoic acid synthase subunit (pha_synth_iii_e)SAMN05519226_0289Not AvailablePositive173409 - 17414628169.9

Displaying genes 161 – 170 of 360 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.