Cycloclasticus pugetii

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus pugetii is a marine bacterium characterized by its single replicon, which is indicated by its genomic structure. The organism is cataloged in the NCBI database with the accession number FQZJ00000000.1, providing a reference point for genetic and genomic studies. This bacterium is notable for its ecological role, particularly in the degradation of polycyclic aromatic hydrocarbons (PAHs), compounds often found in marine environments as pollutants. Cycloclasticus pugetii contributes to the bioremediation processes, breaking down these complex organic molecules and thus playing a significant role in maintaining the health of marine ecosystems affected by hydrocarbon contamination. Understanding the genetic makeup and functional capabilities of Cycloclasticus pugetii can offer insights into its potential applications in environmental biotechnology, especially in efforts to combat pollution in marine habitats. The study of such organisms is crucial for developing strategies aimed at harnessing their natural abilities to degrade harmful substances, ultimately supporting ecosystem recovery and resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus pugetii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cycloclasticus pugetii strain DSM 27168 genome assembly, contig:

Gene Summary

Adenine Count

745157 bp

Thymine Count

739133 bp

Guanine Count

509061 bp

Cytosine Count

547097 bp

Genome Length

2540448 bp

Protein-coding Genes

2391 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anthranilate 1,2-dioxygenase large subunitSAMN05519226_0260Not AvailableNegative142986 - 14423947097.3
anthranilate 1,2-dioxygenase small subunitSAMN05519226_0261Not AvailableNegative144255 - 14474018789.4
2-isopropylmalate synthaseSAMN05519226_0262Not AvailableNegative144980 - 14653355899.4
hypothetical proteinSAMN05519226_0263Not AvailableNegative146617 - 1467816114.79
hypothetical proteinSAMN05519226_0264Not AvailableNegative146778 - 14708611223.6
ribosome association toxin past (rata) of the ratab toxin-antitoxin moduleSAMN05519226_0265Not AvailableNegative147079 - 14751016301.6
neurotransmitter:na+ symporter, nss familySAMN05519226_0266Not AvailableNegative147515 - 14886748943.2
ssra-binding proteinSAMN05519226_0267Not AvailablePositive148977 - 14945318130.2
Tmrna,resume consensus sequence (at 84): tatagttgcaaacgacgaNot AvailableNot AvailablePositive149680 - 150055Not Available
hypothetical proteinSAMN05519226_0269Not AvailablePositive150219 - 1503625247.58

Displaying genes 141 – 150 of 360 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.